Sudhir Kumar

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Koichiro TamuraDirector, Professor, Research Center for Genomics and Bioinformatics, Tokyo Metropolitan UniversityVerified email at tmu.ac.jp
Masatoshi NeiLaura Carnell Professor of Biology, Temple UniversityVerified email at temple.edu
Alan FilipskiArtizona State UniversityVerified email at asu.edu
S. Blair HedgesDirector, Center for Biodiversity; Carnell Professor, Temple UniversityVerified email at temple.edu
Joel DudleyInstitute Director and Associate Professor, Icahn School of Medicine at Mount SinaiVerified email at mssm.edu
Maxwell SanderfordDatabase developer, Temple UniversityVerified email at temple.edu
Qiqing TaoInstitute for Genomics and Evolutionary Medicine, Temple UniversityVerified email at temple.edu
Fabia Ursula BattistuzziOakland UniversityVerified email at oakland.edu
Sayaka MiuraUniversity of MississippiVerified email at olemiss.edu
Jieping Ye, IEEE Fellow & ACM Distin...Alibaba GroupVerified email at umich.edu
Sankar SubramanianUniversity of the Sunshine CoastVerified email at usc.edu.au
Nick PetersonGlaxoSmithKlineVerified email at gsk.com
Michael SuleskiTemple UniversityVerified email at temple.edu
Shuiwang Ji, Professor and Truchard...Department of Computer Science & Engineering, Texas A&M UniversityVerified email at tamu.edu
Michael S. RosenbergVirginia Commonwealth UniversityVerified email at vcu.edu
Sudhindra GadagkarMidwestern UniversityVerified email at midwestern.edu
S. Banu OzkanProfessor of Physics, Arizona State UniversityVerified email at asu.edu
Jack CraigTemple UniversityVerified email at temple.edu
Sergei L Kosakovsky PondProfessor of Biology, Institute for Genomics and Evolutionary Medicine, Temple UniversityVerified email at temple.edu
Jeffrey TownsendElihu Professor of Biostatistics and Ecology & Evolutionary BiologyVerified email at Yale.edu

Sudhir Kumar

Director, iGEM, Carnell Professor of Biology, Temple University

Verified email at temple.edu - Homepage

Genomics Phylogenetics Bioinformatics Medicine Ecology


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MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods K Tamura, D Peterson, N Peterson, G Stecher, M Nei, S Kumar Molecular biology and evolution 28 (10), 2731-2739, 2011	47965	2011
MEGA6: molecular evolutionary genetics analysis version 6.0 K Tamura, G Stecher, D Peterson, A Filipski, S Kumar Molecular biology and evolution 30 (12), 2725-2729, 2013	47213	2013
MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets S Kumar, G Stecher, K Tamura Molecular biology and evolution 33 (7), 1870-1874, 2016	45116	2016
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 K Tamura, J Dudley, M Nei, S Kumar Molecular biology and evolution 24 (8), 1596-1599, 2007	35724	2007
MEGA X: molecular evolutionary genetics analysis across computing platforms S Kumar, G Stecher, M Li, C Knyaz, K Tamura Molecular biology and evolution 35 (6), 1547-1549, 2018	34532	2018
MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment S Kumar, K Tamura, M Nei Briefings in bioinformatics 5 (2), 150-163, 2004	14296	2004
MEGA11: Molecular Evolutionary Genetics Analysis version 11 K Tamura, G Stecher, S Kumar Molecular Biology and Evolution 38 (7), 3022-3027, 2021	11457	2021
Molecular evolution and phylogenetics M Nei, S Kumar Oxford University Press, 2000	10739	2000
MEGA2: molecular evolutionary genetics analysis software S Kumar, K Tamura, IB Jakobsen, M Nei Bioinformatics 17 (12), 1244-1245, 2001	7656	2001
Prospects for inferring very large phylogenies by using the neighbor-joining method K Tamura, M Nei, S Kumar Proceedings of the National Academy of Sciences of the United States of …, 2004	6360	2004
MEGA: molecular evolutionary genetics analysis software for microcomputers S Kumar, K Tamura, M Nei Bioinformatics 10 (2), 189-191, 1994	4821	1994
MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences S Kumar, M Nei, J Dudley, K Tamura Briefings in bioinformatics 9 (4), 299-306, 2008	4246	2008
TimeTree: a resource for timelines, timetrees, and divergence times S Kumar, G Stecher, M Suleski, SB Hedges Molecular Biology and Evolution 34 (7), 1812-1819, 2017	2593	2017
A molecular timescale for vertebrate evolution S Kumar, SB Hedges Nature 392 (6679), 917-920, 1998	2360	1998
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203, 2007	2259	2007
Molecular Evolutionary Genetics Analysis (MEGA) for macOS G Stecher, K Tamura, S Kumar Molecular Biology and Evolution 37, 1237–1239, 2020	1503	2020
TimeTree: a public knowledge-base of divergence times among organisms SB Hedges, J Dudley, S Kumar Bioinformatics 22 (23), 2971-2972, 2006	1328	2006
Tree of life reveals clock-like speciation and diversification SB Hedges, J Marin, M Suleski, M Paymer, S Kumar Molecular biology and evolution 32 (4), 835-845, 2015	1016	2015
A new method of inference of ancestral nucleotide and amino acid sequences. Z Yang, S Kumar, M Nei Genetics 141 (4), 1641-1650, 1995	813	1995
A molecular timescale of eukaryote evolution and the rise of complex multicellular life SB Hedges, JE Blair, ML Venturi, JL Shoe BMC evolutionary biology 4, 1-9, 2004	742	2004

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