| Alignment of metabolic pathways RY Pinter, O Rokhlenko, E Yeger-Lotem, M Ziv-Ukelson Bioinformatics 21 (16), 3401-3408, 2005 | 280 | 2005 |
| Composite effects of gene determinants on the translation speed and density of ribosomes T Tuller, I Veksler-Lublinsky, N Gazit, M Kupiec, E Ruppin, M Ziv-Ukelson Genome biology 12, 1-18, 2011 | 223 | 2011 |
| A subquadratic sequence alignment algorithm for unrestricted scoring matrices M Crochemore, GM Landau, M Ziv-Ukelson SIAM journal on computing 32 (6), 1654-1673, 2003 | 219 | 2003 |
| Rich parameterization improves RNA structure prediction S Zakov, Y Goldberg, M Elhadad, M Ziv-Ukelson Journal of Computational Biology 18 (11), 1525-1542, 2011 | 133 | 2011 |
| Sparse RNA folding: Time and space efficient algorithms R Backofen, D Tsur, S Zakov, M Ziv-Ukelson Journal of Discrete Algorithms 9 (1), 12-31, 2011 | 84 | 2011 |
| A study of accessible motifs and RNA folding complexity Y Wexler, C Zilberstein, M Ziv-Ukelson Journal of Computational Biology 14 (6), 856-872, 2007 | 84 | 2007 |
| On the common substring alignment problem GM Landau, M Ziv-Ukelson Journal of Algorithms 41 (2), 338-359, 2001 | 64 | 2001 |
| The 3′-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein A Loya, L Pnueli, Y Yosefzon, Y Wexler, M Ziv-Ukelson, Y Arava Rna 14 (7), 1352-1365, 2008 | 63 | 2008 |
| Approximate labelled subtree homeomorphism RY Pinter, O Rokhlenko, D Tsur, M Ziv-Ukelson Journal of Discrete Algorithms 6 (3), 480-496, 2008 | 60* | 2008 |
| Speeding up HMM decoding and training by exploiting sequence repetitions S Mozes, O Weimann, M Ziv-Ukelson Annual Symposium on Combinatorial Pattern Matching, 4-15, 2007 | 55* | 2007 |
| An asymmetrically balanced organization of kinases versus phosphatases across eukaryotes determines their distinct impacts I Smoly, N Shemesh, M Ziv-Ukelson, A Ben-Zvi, E Yeger-Lotem PLoS computational biology 13 (1), e1005221, 2017 | 53 | 2017 |
| The microRNA transcriptome of human cytomegalovirus (HCMV) MK Meshesha, I Veksler-Lublinsky, O Isakov, I Reichenstein, N Shomron, ... The open virology journal 6, 38, 2012 | 53 | 2012 |
| Seeded tree alignment A Lozano, RY Pinter, O Rokhlenko, G Valiente, M Ziv-Ukelson IEEE/ACM transactions on Computational Biology and Bioinformatics 5 (4), 503-513, 2008 | 47* | 2008 |
| Two algorithms for LCS consecutive suffix alignment GM Landau, E Myers, M Ziv-Ukelson Journal of Computer and System Sciences 73 (7), 1095-1117, 2007 | 45 | 2007 |
| Method and apparatus for linking data in a distributed data processing system T Huynh, RE Strom, MZ Ukelson, DM Yellin US Patent 6,973,656, 2005 | 41 | 2005 |
| A faster algorithm for simultaneous alignment and folding of RNA M Ziv-Ukelson, I Gat-Viks, Y Wexler, R Shamir Journal of Computational Biology 17 (8), 1051-1065, 2010 | 37* | 2010 |
| Reducing the worst case running times of a family of RNA and CFG problems, using Valiant’s approach S Zakov, D Tsur, M Ziv-Ukelson Algorithms for Molecular Biology 6, 1-22, 2011 | 35 | 2011 |
| Gene bi-targeting by viral and human miRNAs I Veksler-Lublinsky, Y Shemer-Avni, K Kedem, M Ziv-Ukelson BMC bioinformatics 11, 1-17, 2010 | 33 | 2010 |
| Online recognition of unconstrained handprinting: a stroke-based system and its evaluation T Fujisaki, HSM Beigi, CC Tappert, M Ukelson, CG Wolf From Pixels to Features III: Frontiers in Handwriting Recognition. Elsevier …, 1992 | 33* | 1992 |
| Sparse LCS common substring alignment GM Landau, B Schieber, M Ziv-Ukelson Information Processing Letters 88 (6), 259-270, 2003 | 28 | 2003 |
Dekel TsurDepartment of Computer Science, Ben-Gurion University of the NegevVerified email at cs.bgu.ac.il
