| A method and server for predicting damaging missense mutations IA Adzhubei, S Schmidt, L Peshkin, VE Ramensky, A Gerasimova, P Bork, ... Nature methods 7 (4), 248-249, 2010 | 14785 | 2010 |
| Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks KS Makarova, MV Omelchenko, EK Gaidamakova, VY Matrosova, ... PloS one 2 (9), e955, 2007 | 298 | 2007 |
| Memory T Cells in Latent Mycobacterium tuberculosis Infection Are Directed against Three Antigenic Islands and Largely Contained in a CXCR3+ CCR6+ Th1 Subset CSL Arlehamn, A Gerasimova, F Mele, R Henderson, J Swann, ... PLoS Pathogens 9 (1), e1003130, 2013 | 263 | 2013 |
| Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility G Seumois, L Chavez, A Gerasimova, M Lienhard, N Omran, L Kalinke, ... Nature immunology 15 (8), 777-788, 2014 | 214 | 2014 |
| A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length AV Favorov, MS Gelfand, AV Gerasimova, DA Ravcheev, AA Mironov, ... Bioinformatics 21 (10), 2240-2245, 2005 | 189 | 2005 |
| Transcriptional profile of tuberculosis antigen–specific T cells reveals novel multifunctional features CL Arlehamn, G Seumois, A Gerasimova, C Huang, Z Fu, X Yue, A Sette, ... The Journal of Immunology 193 (6), 2931-2940, 2014 | 112 | 2014 |
| Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus DA Rodionov, PS Novichkov, ED Stavrovskaya, IA Rodionova, X Li, ... BMC genomics 12, 1-17, 2011 | 81 | 2011 |
| Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enterobacteriaceae, Pasteurellaceae, Vibrionaceae) DA Ravcheev, AV Gerasimova, AA Mironov, MS Gelfand BMC genomics 8, 1-17, 2007 | 68 | 2007 |
| Comparative genomics of the dormancy regulons in mycobacteria A Gerasimova, AE Kazakov, AP Arkin, I Dubchak, MS Gelfand Journal of bacteriology 193 (14), 3446-3452, 2011 | 66 | 2011 |
| Hypermutable non-synonymous sites are under stronger negative selection S Schmidt, A Gerasimova, FA Kondrashov, IA Adzuhbei, AS Kondrashov, ... PLoS genetics 4 (11), e1000281, 2008 | 49 | 2008 |
| Predicting cell types and genetic variations contributing to disease by combining GWAS and epigenetic data A Gerasimova, L Chavez, B Li, G Seumois, J Greenbaum, A Rao, ... PloS one 8 (1), e54359, 2013 | 46 | 2013 |
| Evolution of the NadR regulon in Enterobacteriaceae AV Gerasimova, MS Gelfand Journal of bioinformatics and computational biology 3 (04), 1007-1019, 2005 | 31 | 2005 |
| Development and validation of a high throughput SARS-CoV-2 whole genome sequencing workflow in a clinical laboratory SH Rosenthal, A Gerasimova, R Ruiz-Vega, K Livingston, RM Kagan, ... Scientific Reports 12 (1), 2054, 2022 | 27 | 2022 |
| Identification of eight SARS-CoV-2 ORF7a deletion variants in 2,726 clinical specimens SH Rosenthal, RM Kagan, A Gerasimova, B Anderson, D Grover, M Hua, ... Biorxiv, 2020.12. 10.418855, 2020 | 18 | 2020 |
| Computer analysis of regulatory signals in bacterial genomes. Fnr binding segments AV Gerasimova, DA Rodionov, AA Mironov, MS Gel'fand Molekuliarnaia Biologiia 35 (6), 1001-1009, 2001 | 12 | 2001 |
| Analytical validation and performance characteristics of a 48-gene next-generation sequencing panel for detecting potentially actionable genomic alterations in myeloid neoplasms SH Rosenthal, A Gerasimova, C Ma, HR Li, A Grupe, H Chong, A Acab, ... Plos one 16 (4), e0243683, 2021 | 11 | 2021 |
| ArcA regulator of gamma-proteobacteria: identification of the binding signal and description of the regulon AV Gerasimova, MS Gelfand, VY Makeev, AA Mironov, AV Favorov Biophysics 48 (1), 21-25, 2003 | 10 | 2003 |
| Development and Validation of a 34‐Gene Inherited Cancer Predisposition Panel Using Next‐Generation Sequencing SH Rosenthal, W Sun, K Zhang, Y Liu, Q Nguyen, A Gerasimova, C Nery, ... BioMed Research International 2020 (1), 3289023, 2020 | 8 | 2020 |
| Computer analysis of regulatory signals in bacterial genomes. Fnr binding sites AV Gerasimova, DA Rodionov, AA Mironov, MS Gelfand Molecular Biology 35 (6), 853-861, 2001 | 4 | 2001 |
| Comparative genomics and evolution of bacterial regulatory systems MS Gelfand, AV Gerasimova, EA Kotelnikova, ON Laikova, VY Makeev, ... Bioinformatics of Genome Regulation and Structure II, 111-119, 2006 | 3 | 2006 |
Ivan AdzhubeiHarvard Medical School, Dept of Bioimedical Informatics (DBMI)Verified email at hms.harvard.edu
