Leo van Iersel

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Steven KelkAssociate professor, Department of Advanced Computing Sciences, Maastricht UniversityVerified email at maastrichtuniversity.nl
Leen StougieSenior Researcher CWI, Prof. of Operations Research Vrije Universiteit, AmsterdamVerified email at cwi.nl
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Yukihiro MurakamiAssistant Professor, TU DelftVerified email at tudelft.nl
Remie JanssenDevOps engineer, RIVMVerified email at rivm.nl
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Norbert ZehProfessor of Computer Science, Dalhousie UniversityVerified email at cs.dal.ca
teun boekhoutCBS Fungal Biodiversity CentreVerified email at cbs.knaw.nl
Ferry HagenGroup Leader / Medical Molecular MicrobiologistVerified email at wi.knaw.nl
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz
Nela LekicPhD candidate, Maastricht UniversityVerified email at maastrichtuniversity.nl
Alexander SchönhuthProfessor, Faculty for Technology, Bielefeld UniversityVerified email at cebitec.uni-bielefeld.de
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
taoyang wuLecturer of Computational Biology, University of East AngliaVerified email at uea.ac.uk
Tobias MarschallHeinrich Heine University DüsseldorfVerified email at hhu.de
Charles SempleProfessor of Mathematics, University of CanterburyVerified email at canterbury.ac.nz
Luay NakhlehProfessor of Computer Science and Dean of Engineering and Computing, Rice UniversityVerified email at rice.edu
Axel JankeProfessor Ecological Genomics, BiK-F/Goethe University/SenckenbergVerified email at senckenberg.de
James B. WhitfieldProfessor of Entomology, University of IllinoisVerified email at life.illinois.edu

Leo van Iersel

Associate professor, TU Delft

Verified email at tudelft.nl - Homepage

algorithms computational biology phylogenetics graphs


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WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015	415*	2015
Networks: expanding evolutionary thinking E Bapteste, L van Iersel, A Janke, S Kelchner, S Kelk, JO McInerney, ... Trends in Genetics 29 (8), 439-441, 2013	205	2013
Ancient Dispersal of the Human Fungal Pathogen Cryptococcus gattii from the Amazon Rainforest F Hagen, PC Ceresini, I Polacheck, H Ma, F Nieuwerburgh, T Gabaldón, ... PloS one 8 (8), e71148, 2013	164	2013
The complexity of the single individual SNP haplotyping problem R Cilibrasi, L Van Iersel, S Kelk, J Tromp Algorithmica 49, 13-36, 2007	159*	2007
Geographically structured populations of Cryptococcus neoformans variety grubii in Asia correlate with HIV status and show a clonal population structure K Khayhan, F Hagen, W Pan, S Simwami, MC Fisher, R Wahyuningsih, ... PLoS One 8 (9), e72222, 2013	115	2013
Constructing level-2 phylogenetic networks from triplets L Van Iersel, J Keijsper, S Kelk, L Stougie, F Hagen, T Boekhout Annual International Conference on Research in Computational Molecular …, 2008	98	2008
Locating a tree in a phylogenetic network L Van Iersel, C Semple, M Steel Information Processing Letters 110 (23), 1037-1043, 2010	95	2010
Phylogenetic networks do not need to be complex: using fewer reticulations to represent conflicting clusters L Van Iersel, S Kelk, R Rupp, D Huson Bioinformatics 26 (12), i124-i131, 2010	77	2010
Nonbinary tree-based phylogenetic networks L Jetten, L van Iersel IEEE/ACM transactions on computational biology and bioinformatics 15 (1 …, 2016	62	2016
Constructing the simplest possible phylogenetic network from triplets L van Iersel, S Kelk Algorithmica 60 (2), 207-235, 2011	62	2011
Every ternary permutation constraint satisfaction problem parameterized above average has a kernel with a quadratic number of variables G Gutin, L van Iersel, M Mnich, A Yeo Journal of Computer and System Sciences, 2011	58	2011
Trinets encode tree-child and level-2 phylogenetic networks L Van Iersel, V Moulton Journal of mathematical biology 68 (7), 1707-1729, 2014	55	2014
Uniqueness, intractability and exact algorithms: reflections on level-k phylogenetic networks L Van Iersel, S Kelk, M Mnich Journal of Bioinformatics and Computational Biology 7 (04), 597-623, 2009	43	2009
A practical algorithm for reconstructing level-1 phylogenetic networks KT Huber, L Van Iersel, S Kelk, R Suchecki IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (3), 635-649, 2010	39	2010
How much information is needed to infer reticulate evolutionary histories? KT Huber, L Van Iersel, V Moulton, T Wu Systematic Biology 64 (1), 102-111, 2015	38	2015
On computing the maximum parsimony score of a phylogenetic network M Fischer, L Van Iersel, S Kelk, C Scornavacca SIAM Journal on Discrete Mathematics 29 (1), 559-585, 2015	36	2015
Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets KT Huber, L Van Iersel, V Moulton, C Scornavacca, T Wu Algorithmica 77, 173-200, 2017	34	2017
Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes E Gross, L van Iersel, R Janssen, M Jones, C Long, Y Murakami Journal of Mathematical Biology 83, 1-24, 2021	33	2021
When two trees go to war L van Iersel, S Kelk Journal of Theoretical Biology, 2010	33	2010
Exploring the tiers of rooted phylogenetic network space using tail moves R Janssen, M Jones, PL Erdős, L Van Iersel, C Scornavacca Bulletin of mathematical biology 80, 2177-2208, 2018	32	2018

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