Sarah Cohen-Boulakia

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Susan DavidsonUniversity of PennsylvaniaVerified email at cis.upenn.edu
Frédéric LemoineInstitut PasteurVerified email at pasteur.fr
Christophe PradalUMR AGAP, CIRAD & Zenith, InriaVerified email at cirad.fr
Ulf LeserKnowledge Management in Bioinformatics, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Bryan BrancotteInstitut Pasteur – Hub de Bioinformatique et Biostatistique – Département Biologie ComputationnelleVerified email at pasteur.fr
Alain DeniseUniversité Paris-SaclayVerified email at lri.fr
Juliana FreireNew York UniversityVerified email at nyu.edu
Carole GobleProfessor of Computer Science, University of ManchesterVerified email at manchester.ac.uk
Patrick ValduriezInriaVerified email at inria.fr
Alban GaignardCNRSVerified email at univ-nantes.fr
Sanjeev KhannaHenry Salvatori Professor of Computer Science, University of PennsylvaniaVerified email at cis.upenn.edu
Johannes StarlingerComputer Science PostDoc, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Jerome ChopardResearch associateVerified email at polytechnique.org
Khalid BelhajjamePSL, Université Paris-Dauphine, LAMSADEVerified email at dauphine.fr
Christian FournierINRAEVerified email at inrae.fr
Hervé MénagerInstitut PasteurVerified email at pasteur.fr
Michael MielewczikAgroscopeVerified email at agroscope.admin.ch
Sylvie HamelProfesseure titulaire, Informatique et recherche opérationnelle, Université de MontréalVerified email at umontreal.ca
Pierre LarmandeIRD (Institute of Research for Development) - DIADE UnitVerified email at ird.fr
Yvan Le BrasMuséum national d'histoire naturelleVerified email at mnhn.fr

Sarah Cohen-Boulakia

Professor, Université Paris-Saclay

Verified email at lri.fr - Homepage

Scientific workflows Workflows Provenance Ranking Data Integration


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Provenance in Scientific Workflow Systems S Davidson, S Cohen-Boulakia, A Eyal, B Ludascher, T McPhillips, ... IEEE Data Engineering Bulletin 32, 44-50, 2007	978*	2007
NGPhylogeny. fr: new generation phylogenetic services for non-specialists F Lemoine, D Correia, V Lefort, O Doppelt-Azeroual, F Mareuil, ... Nucleic acids research 47 (W1), W260-W265, 2019	707	2019
The first provenance challenge L Moreau, B Ludäscher, I Altintas, RS Barga, S Bowers, S Callahan, ... Concurrency and computation: practice and experience 20 (5), 409-418, 2008	305	2008
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities S Cohen-Boulakia, K Belhajjame, O Collin, J Chopard, C Froidevaux, ... Future Generation Computer Systems 75, 284-298, 2017	195	2017
Querying and managing provenance through user views in scientific workflows O Biton, S Cohen-Boulakia, SB Davidson, CS Hara Data Engineering, 2008. ICDE 2008. IEEE 24th International Conference on …, 2008	191	2008
FAIR computational workflows C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ... Data Intelligence 2 (1-2), 108-121, 2020	184	2020
The CoLoMoTo interactive notebook: accessible and reproducible computational analyses for qualitative biological networks A Naldi, C Hernandez, N Levy, G Stoll, PT Monteiro, C Chaouiya, ... Frontiers in physiology 9, 680, 2018	104	2018
Towards a model of provenance and user views in scientific workflows S Cohen, S Cohen-Boulakia, S Davidson Data Integration in the Life Sciences, 264-279, 2006	93	2006
Differencing provenance in scientific workflows Z Bao, S Cohen-Boulakia, SB Davidson, A Eyal, S Khanna 2009 IEEE 25th International Conference on Data Engineering, 808-819, 2009	84	2009
Addressing the provenance challenge using zoom S Cohen‐Boulakia, O Biton, S Cohen, S Davidson Concurrency and Computation: Practice and Experience 20 (5), 497-506, 2008	84	2008
Search, adapt, and reuse: the future of scientific workflows S Cohen-Boulakia, U Leser ACM SIGMOD Record 40 (2), 6-16, 2011	81	2011
Zoom* UserViews: Querying Relevant Provenance in Workflow Systems. O Biton, SC Boulakia, SB Davidson VLDB 7, 1366-1369, 2007	78	2007
Similarity search for scientific workflows J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser Proceedings of the VLDB Endowment (PVLDB) 7 (12), 1143-1154, 2014	75	2014
OpenAlea: scientific workflows combining data analysis and simulation C Pradal, C Fournier, P Valduriez, S Cohen-Boulakia Proceedings of the 27th international conference on scientific and …, 2015	66	2015
Rank aggregation with ties: Experiments and analysis B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel Proceedings of the VLDB Endowment (PVLDB) 8 (11), 1202-1213, 2015	58	2015
Data integration in the life sciences F Bastian, G Parmentier, J Roux, S Moretti, V Laudet, ... Lecture Notes in Computer Science, 124-131, 2008	53	2008
BioGuideSRS: querying multiple sources with a user-centric perspective S Cohen-Boulakia, O Biton, S Davidson, C Froidevaux Bioinformatics 23 (10), 1301-1303, 2007	53	2007
Using medians to generate consensus rankings for biological data S Cohen-Boulakia, A Denise, S Hamel Scientific and Statistical Database Management: 23rd International …, 2011	47	2011
Proteome informatics II: bioinformatics for comparative proteomics F Lisacek, S Cohen‐Boulakia, RD Appel Proteomics 6 (20), 5445-5466, 2006	46	2006
Distilling structure in Taverna scientific workflows: a refactoring approach S Cohen-Boulakia, J Chen, P Missier, C Goble, AR Williams, ... BMC bioinformatics 15, 1-14, 2014	37	2014

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