| Signatures of mutational processes in human cancer LB Alexandrov, S Nik-Zainal, DC Wedge, SAJR Aparicio, S Behjati, ... nature 500 (7463), 415-421, 2013 | 10293 | 2013 |
| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1934* | 2020 |
| The primary transcriptome of the major human pathogen Helicobacter pylori CM Sharma, S Hoffmann, F Darfeuille, J Reignier, S Findeiß, A Sittka, ... Nature 464 (7286), 250-255, 2010 | 1332 | 2010 |
| The African coelacanth genome provides insights into tetrapod evolution CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ... Nature 496 (7445), 311-316, 2013 | 758 | 2013 |
| Fast mapping of short sequences with mismatches, insertions and deletions using index structures S Hoffmann, C Otto, S Kurtz, CM Sharma, P Khaitovich, J Vogel, ... PLoS computational biology 5 (9), e1000502, 2009 | 659 | 2009 |
| Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing Nature genetics 44 (12), 1316-1320, 2012 | 500 | 2012 |
| Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, L Ann Blomberg, ... PLoS biology 8 (9), e1000475, 2010 | 473 | 2010 |
| Alu Elements in ANRIL Non-Coding RNA at Chromosome 9p21 Modulate Atherogenic Cell Functions through Trans-Regulation of Gene Networks LM Holdt, S Hoffmann, K Sass, D Langenberger, M Scholz, K Krohn, ... PLoS genetics 9 (7), e1003588, 2013 | 419 | 2013 |
| Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ... Nature genetics 52 (3), 306-319, 2020 | 364 | 2020 |
| metilene: Fast and sensitive calling of differentially methylated regions from bisulfite sequencing data F Jühling, H Kretzmer, SH Bernhart, C Otto, PF Stadler, S Hoffmann Genome Research 26 (2), 256-262, 2016 | 337 | 2016 |
| A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection S Hoffmann, C Otto, G Doose, A Tanzer, D Langenberger, S Christ, ... Genome biology 15, 1-11, 2014 | 302 | 2014 |
| Evolution of vault RNAs PF Stadler, JJL Chen, J Hackermüller, S Hoffmann, F Horn, P Khaitovich, ... Molecular biology and evolution 26 (9), 1975-1991, 2009 | 176 | 2009 |
| Evidence for human microRNA-offset RNAs in small RNA sequencing data D Langenberger, C Bermudez-Santana, J Hertel, S Hoffmann, ... Bioinformatics 25 (18), 2298-2301, 2009 | 158 | 2009 |
| DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control H Kretzmer, SH Bernhart, W Wang, A Haake, MA Weniger, AK Bergmann, ... Nature genetics 47 (11), 1316-1325, 2015 | 148 | 2015 |
| In vitro chemosensitivity of freshly explanted tumor cells to pemetrexed is correlated with target gene expression AR Hanauske, U Eismann, O Oberschmidt, H Pospisil, S Hoffmann, ... Investigational new drugs 25, 417-423, 2007 | 138 | 2007 |
| Lacking alignments? The next-generation sequencing mapper segemehl revisited C Otto, PF Stadler, S Hoffmann Bioinformatics 30 (13), 1837-1843, 2014 | 133 | 2014 |
| Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions C Schmidtke, S Findeiß, CM Sharma, J Kuhfuß, S Hoffmann, J Vogel, ... Nucleic acids research 40 (5), 2020-2031, 2012 | 133 | 2012 |
| HLA-DRB1∗ 0401 and HLA-DRB1∗ 0408 are strongly associated with the development of antibodies against interferon-β therapy in multiple sclerosis S Hoffmann, S Cepok, V Grummel, K Lehmann-Horn, J Hackermueller, ... The American Journal of Human Genetics 83 (2), 219-227, 2008 | 132 | 2008 |
| Genomic and transcriptomic changes complement each other in the pathogenesis of sporadic Burkitt lymphoma C López, K Kleinheinz, SM Aukema, M Rohde, SH Bernhart, ... Nature communications 10 (1), 1459, 2019 | 126 | 2019 |
| Changes of bivalent chromatin coincide with increased expression of developmental genes in cancer SH Bernhart, H Kretzmer, LM Holdt, F Jühling, O Ammerpohl, ... Scientific reports 6 (1), 37393, 2016 | 124 | 2016 |
Peter F StadlerProfessor of Bioinformatics, Univ. LeipzigVerified email at bioinf.uni-leipzig.de
