| A data integration methodology for systems biology D Hwang, AG Rust, S Ramsey, JJ Smith, DM Leslie, AD Weston, ... Proceedings of the National Academy of Sciences 102 (48), 17296-17301, 2005 | 389 | 2005 |
| Transport in two-dimensional paper networks E Fu, SA Ramsey, P Kauffman, B Lutz, P Yager Microfluidics and nanofluidics 10 (1), 29-35, 2011 | 386 | 2011 |
| Cholesterol loading reprograms the microRNA-143/145–myocardin axis to convert aortic smooth muscle cells to a dysfunctional macrophage-like phenotype Y Vengrenyuk, H Nishi, X Long, M Ouimet, N Savji, FO Martinez, ... Arteriosclerosis, thrombosis, and vascular biology 35 (3), 535-546, 2015 | 355 | 2015 |
| Inflammatory Ly6Chi monocytes and their conversion to M2 macrophages drive atherosclerosis regression K Rahman, Y Vengrenyuk, SA Ramsey, NR Vila, NM Girgis, J Liu, ... The Journal of clinical investigation 127 (8), 2904-2915, 2017 | 336 | 2017 |
| Function of C/EBPδ in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals V Litvak, SA Ramsey, AG Rust, DE Zak, KA Kennedy, AE Lampano, ... Nature immunology 10 (4), 437-443, 2009 | 335 | 2009 |
| Dizzy: stochastic simulation of large-scale genetic regulatory networks S Ramsey, D Orrell, H Bolouri Journal of bioinformatics and computational biology 3 (02), 415-436, 2005 | 307 | 2005 |
| Single-cell analysis of fate-mapped macrophages reveals heterogeneity, including stem-like properties, during atherosclerosis progression and regression JD Lin, H Nishi, J Poles, X Niu, C Mccauley, K Rahman, EJ Brown, ... JCI insight 4 (4), 2019 | 294 | 2019 |
| Enhanced sensitivity of lateral flow tests using a two-dimensional paper network format E Fu, T Liang, J Houghtaling, S Ramachandran, SA Ramsey, B Lutz, ... Analytical chemistry 83 (20), 7941-7946, 2011 | 277 | 2011 |
| Gene expression dynamics in the macrophage exhibit criticality M Nykter, ND Price, M Aldana, SA Ramsey, SA Kauffman, LE Hood, ... Proceedings of the National Academy of Sciences 105 (6), 1897-1900, 2008 | 275 | 2008 |
| Method and system for directing requests for content to a content server based on network performance M Ayers, BJ Black, C Brown, J Carlson, D Cohn, S Laird, J Miller, ... US Patent 7,555,542, 2009 | 246 | 2009 |
| Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics SA Ramsey, SL Klemm, DE Zak, KA Kennedy, V Thorsson, B Li, ... PLoS computational biology 4 (3), e1000021, 2008 | 231 | 2008 |
| ATF3, an adaptive-response gene, enhances TGFβ signaling and cancer-initiating cell features in breast cancer cells X Yin, CC Wolford, YS Chang, SJ McConoughey, SA Ramsey, A Aderem, ... Journal of cell science 123 (20), 3558-3565, 2010 | 200 | 2010 |
| Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform RJ Taylor, D Falconnet, A Niemistö, SA Ramsey, S Prinz, I Shmulevich, ... Proceedings of the National Academy of Sciences 106 (10), 3758-3763, 2009 | 187 | 2009 |
| ATF3 protects against atherosclerosis by suppressing 25-hydroxycholesterol–induced lipid body formation ES Gold, SA Ramsey, MJ Sartain, J Selinummi, I Podolsky, DJ Rodriguez, ... Journal of Experimental Medicine 209 (4), 807-817, 2012 | 171 | 2012 |
| A data integration methodology for systems biology: experimental verification D Hwang, JJ Smith, DM Leslie, AD Weston, AG Rust, S Ramsey, ... Proceedings of the National Academy of Sciences 102 (48), 17302-17307, 2005 | 170 | 2005 |
| Method and system for optimizing routing through multiple available internet route providers A Ahuja, M Ayers, B Black, C Brown, DT Cohn, S Ramsey, O Ronen, ... US Patent 6,981,055, 2005 | 133 | 2005 |
| Dual feedback loops in the GAL regulon suppress cellular heterogeneity in yeast SA Ramsey, JJ Smith, D Orrell, M Marelli, TW Petersen, P de Atauri, ... Nature genetics 38 (9), 1082-1087, 2006 | 122 | 2006 |
| A systems biology approach to understanding atherosclerosis SA Ramsey, ES Gold, A Aderem EMBO molecular medicine 2 (3), 79-89, 2010 | 102 | 2010 |
| O (N) quantum fields in curved spacetime SA Ramsey, BL Hu Physical Review D 56 (2), 661, 1997 | 101 | 1997 |
| Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites SA Ramsey, TA Knijnenburg, KA Kennedy, DE Zak, M Gilchrist, ES Gold, ... Bioinformatics 26 (17), 2071-2075, 2010 | 92 | 2010 |
Alan AderemSeattle BioMedVerified email at seattlebiomed.org
