GATA3 mediates a fast, irreversible commitment to BMP4-driven differentiation in human embryonic stem cells A Gunne-Braden, A Sullivan, B Gharibi, RSM Sheriff, A Maity, YF Wang, ... Cell stem cell 26 (5), 693-706. e9, 2020 | 59 | 2020 |
Information transmission from NFkB signaling dynamics to gene expression A Maity, R Wollman PLoS computational biology 16 (8), e1008011, 2020 | 23 | 2020 |
Ultra-fast scalable estimation of single-cell differentiation potency from scRNA-Seq data AE Teschendorff, AK Maity, X Hu, C Weiyan, M Lechner Bioinformatics 37 (11), 1528-1534, 2021 | 22 | 2021 |
Computational identification of preneoplastic cells displaying high stemness and risk of cancer progression T Liu, X Zhao, Y Lin, Q Luo, S Zhang, Y Xi, Y Chen, L Lin, W Fan, J Yang, ... Cancer Research 82 (14), 2520-2537, 2022 | 17 | 2022 |
Inference of age-associated transcription factor regulatory activity changes in single cells AK Maity, X Hu, T Zhu, AE Teschendorff Nature Aging 2 (6), 548-561, 2022 | 16 | 2022 |
Role of relaxation time scale in noisy signal transduction AK Maity, P Chaudhury, SK Banik PLoS One 10 (5), e0123242, 2015 | 16 | 2015 |
Role of functionality in two-component signal transduction: a stochastic study AK Maity, A Bandyopadhyay, P Chaudhury, SK Banik Physical Review E 89 (3), 032713, 2014 | 14 | 2014 |
Novel epigenetic network biomarkers for early detection of esophageal cancer AK Maity, TC Stone, V Ward, AP Webster, Z Yang, A Hogan, H McBain, ... Clinical Epigenetics 14 (1), 23, 2022 | 13 | 2022 |
Myoscaffolds reveal laminin scarring is detrimental for stem cell function while sarcospan induces compensatory fibrosis KM Stearns-Reider, MR Hicks, KG Hammond, JC Reynolds, A Maity, ... NPJ Regenerative medicine 8 (1), 16, 2023 | 12 | 2023 |
Controlling mobility via rapidly oscillating time-periodic stimulus P Sarkar, AK Maity, A Shit, S Chattopadhyay, JR Chaudhuri, SK Banik Chemical Physics Letters 602, 4-9, 2014 | 7 | 2014 |
Information theoretical study of cross-talk mediated signal transduction in MAPK pathways AK Maity, P Chaudhury, SK Banik Entropy 19 (9), 469, 2017 | 6 | 2017 |
Cell-attribute aware community detection improves differential abundance testing from single-cell RNA-Seq data AK Maity, AE Teschendorff Nature Communications 14 (1), 3244, 2023 | 4 | 2023 |
Epigenetic fluctuations underlie gene expression timescales and variability R Lannan, A Maity, R Wollman Physiological Genomics 54 (6), 220-229, 2022 | 4 | 2022 |
Analysis of DevR regulated genes in Mycobacterium tuberculosis A Bandyopadhyay, S Biswas, AK Maity, SK Banik Systems and synthetic biology 8, 3-20, 2014 | 3 | 2014 |
Quantification of noise in bifunctionality-induced post-translational modification AK Maity, A Bandyopadhyay, S Chattopadhyay, JR Chaudhuri, R Metzler, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 88 (3 …, 2013 | 3 | 2013 |
Distance covariance entropy reveals primed states and bifurcation dynamics in single-cell RNA-Seq data Q Luo, AK Maity, AE Teschendorff Iscience 25 (12), 2022 | 1 | 2022 |
Optimal decoding of NFkB signaling dynamic A Maity, R Wollman bioRxiv, 595272, 2019 | | 2019 |