| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 17596 | 2012 |
| The accessible chromatin landscape of the human genome RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ... Nature 489 (7414), 75-82, 2012 | 3207 | 2012 |
| An expansive human regulatory lexicon encoded in transcription factor footprints S Neph, J Vierstra, AB Stergachis, AP Reynolds, E Haugen, B Vernot, ... Nature 489 (7414), 83-90, 2012 | 959 | 2012 |
| Circuitry and dynamics of human transcription factor regulatory networks S Neph, AB Stergachis, A Reynolds, R Sandstrom, E Borenstein, ... Cell 150 (6), 1274-1286, 2012 | 554 | 2012 |
| Developmental fate and cellular maturity encoded in human regulatory DNA landscapes AB Stergachis, S Neph, A Reynolds, R Humbert, B Miller, SL Paige, ... Cell 154 (4), 888-903, 2013 | 394 | 2013 |
| Exonic transcription factor binding directs codon choice and affects protein evolution AB Stergachis, E Haugen, A Shafer, W Fu, B Vernot, A Reynolds, ... Science 342 (6164), 1367-1372, 2013 | 358 | 2013 |
| Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana AM Sullivan, AA Arsovski, J Lempe, KL Bubb, MT Weirauch, PJ Sabo, ... Cell reports 8 (6), 2015-2030, 2014 | 276 | 2014 |
| Conservation of trans-acting circuitry during mammalian regulatory evolution AB Stergachis, S Neph, R Sandstrom, E Haugen, AP Reynolds, M Zhang, ... Nature 515 (7527), 365-370, 2014 | 252 | 2014 |
| Panorama: a targeted proteomics knowledge base V Sharma, J Eckels, GK Taylor, NJ Shulman, AB Stergachis, SA Joyner, ... Journal of proteome research 13 (9), 4205-4210, 2014 | 229 | 2014 |
| Single-molecule regulatory architectures captured by chromatin fiber sequencing AB Stergachis, BM Debo, E Haugen, LS Churchman, ... Science 368 (6498), 1449-1454, 2020 | 156 | 2020 |
| DNase I–hypersensitive exons colocalize with promoters and distal regulatory elements TR Mercer, SL Edwards, MB Clark, SJ Neph, H Wang, AB Stergachis, ... Nature genetics 45 (8), 852-859, 2013 | 151 | 2013 |
| Rapid empirical discovery of optimal peptides for targeted proteomics AB Stergachis, B MacLean, K Lee, JA Stamatoyannopoulos, MJ MacCoss Nature methods 8 (12), 1041-1043, 2011 | 148 | 2011 |
| Personal and population genomics of human regulatory variation B Vernot, AB Stergachis, MT Maurano, J Vierstra, S Neph, RE Thurman, ... Genome research 22 (9), 1689-1697, 2012 | 139 | 2012 |
| Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions KM Girskis, AB Stergachis, EM DeGennaro, RN Doan, X Qian, ... Neuron 109 (20), 3239-3251. e7, 2021 | 137 | 2021 |
| The SH2 domain–containing proteins in 21 species establish the provenance and scope of phosphotyrosine signaling in eukaryotes BA Liu, E Shah, K Jablonowski, A Stergachis, B Engelmann, PD Nash Science signaling 4 (202), ra83-ra83, 2011 | 122 | 2011 |
| Beyond the exome: what’s next in diagnostic testing for Mendelian conditions MH Wojcik, CM Reuter, S Marwaha, M Mahmoud, MH Duyzend, ... The American Journal of Human Genetics 110 (8), 1229-1248, 2023 | 67 | 2023 |
| Using data independent acquisition (DIA) to model high-responding peptides for targeted proteomics experiments BC Searle, JD Egertson, JG Bollinger, AB Stergachis, MJ MacCoss Molecular & Cellular Proteomics 14 (9), 2331-2340, 2015 | 56 | 2015 |
| SRC Homology 2 Domain Binding Sites in Insulin, IGF-1 and FGF receptor mediated signaling networks reveal an extensive potential interactome BA Liu, BW Engelmann, K Jablonowski, K Higginbotham, AB Stergachis, ... Cell Communication and Signaling 10, 1-23, 2012 | 45 | 2012 |
| Recurrent SLC1A2 variants cause epilepsy via a dominant negative mechanism AB Stergachis, J Pujol‐Giménez, G Gyimesi, D Fuster, G Albano, ... Annals of neurology 85 (6), 921-926, 2019 | 31 | 2019 |
| Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA RS Isaac, TW Tullius, KG Hansen, D Dubocanin, M Couvillion, ... Nature structural & molecular biology 31 (3), 568-577, 2024 | 30 | 2024 |
