| Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015 | 238 | 2015 |
| OTO: ontology term organizer F Huang, JA Macklin, H Cui, HA Cole, L Endara BMC bioinformatics 16 (1), 47, 2015 | 218* | 2015 |
| Applications of natural language processing in biodiversity science AE Thessen, H Cui, D Mozzherin Advances in bioinformatics 2012, 2012 | 101 | 2012 |
| An overview of the BioCreative 2012 Workshop Track III: interactive text mining task CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ... Database 2013, bas056, 2013 | 86 | 2013 |
| CharaParser for fine‐grained semantic annotation of organism morphological descriptions H Cui Journal of the American Society for Information Science and Technology 63 (4 …, 2012 | 79 | 2012 |
| Nose to tail, roots to shoots: spatial descriptors for phenotypic diversity in the Biological Spatial Ontology WM Dahdul, H Cui, PM Mabee, CJ Mungall, D Osumi-Sutherland, ... J. Biomed. Semantics 5, 21, 2014 | 50 | 2014 |
| Next-generation phenomics for the Tree of Life JG Burleigh, K Alphonse, AJ Alverson, HM Bik, C Blank, AL Cirranello, ... PLoS currents 5, 2013 | 50 | 2013 |
| OTO: Ontology term organizer F Huang, J Macklin, PJ Morris, PP Sanyal, RA Morris, H Cui Proceedings of the American Society for Information Science and Technology …, 2012 | 39* | 2012 |
| Semantic annotation of biosystematics literature without training examples H Cui, D Boufford, P Selden Journal of the American Society for Information Science and Technology 61 (3 …, 2010 | 30 | 2010 |
| The reusability of induced knowledge for the automatic semantic markup of taxonomic descriptions H Cui, PB Heidorn Journal of the American Society for Information Science and Technology 58 (1 …, 2007 | 30 | 2007 |
| Competency evaluation of plant character ontologies against domain literature H Cui Journal of the American Society for Information Science and Technology 61 (6 …, 2010 | 24 | 2010 |
| Semantic annotation of morphological descriptions: an overall strategy H Cui BMC bioinformatics 11 (1), 278, 2010 | 21 | 2010 |
| An approach to automatic classification of text for information retrieval H Cui, PB Heidorn, H Zhang Proceedings of the 2nd ACM/IEEE-CS joint conference on Digital libraries, 96-97, 2002 | 20 | 2002 |
| Converting taxonomic descriptions to new digital formats H Cui Biodiversity Informatics 5, 20-40, 2008 | 19 | 2008 |
| A Machine Learning Approach for Rating the Quality of Depression Treatment Web Pages Y Zhang, H Cui, J Burkell, RE Mercer iConference 2014 Proceedings, 2014 | 9 | 2014 |
| Combine unsupervised learning and heuristic rules to annotate organism morphological descriptions H Cui, S Singaram, A Janning Proceedings of the American Society for Information Science and Technology …, 2011 | 9 | 2011 |
| Automating semantic markup of semi-structured text via an induced knowledge base: a case study using floras H Cui University of Illinois at Urbana-Champaign, 2005 | 9 | 2005 |
| MARTT: Automatic Markup of Taxonomic Descriptions with XML H Cui Proceedings of the Annual Conference of CAIS/Actes du congrès annuel de l'ACSI, 2013 | 8* | 2013 |
| Unsupervised semantic markup of literature for biodiversity digital libraries H Cui Proceedings of the 8th ACM/IEEE-CS Joint Conference on Digital libraries, 25-28, 2008 | 8 | 2008 |
| MARTT: a general approach to automatic mark-up of taxonomic descriptions with XML H Cui Communications of the AIS. Also available on http://cais-acsi. ca …, 2005 | 7 | 2005 |
