| Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ... Science 360 (6385), 176-182, 2018 | 1300 | 2018 |
| Learning the sequence determinants of alternative splicing from millions of random sequences AB Rosenberg, RP Patwardhan, J Shendure, G Seelig Cell 163 (3), 698-711, 2015 | 291 | 2015 |
| Microbial single-cell RNA sequencing by split-pool barcoding A Kuchina, LM Brettner, L Paleologu, CM Roco, AB Rosenberg, ... Science 371 (6531), eaba5257, 2021 | 231 | 2021 |
| Deep learning of the regulatory grammar of yeast 5′ untranslated regions from 500,000 random sequences JT Cuperus, B Groves, A Kuchina, AB Rosenberg, N Jojic, S Fields, ... Genome research 27 (12), 2015-2024, 2017 | 217 | 2017 |
| A deep neural network for predicting and engineering alternative polyadenylation N Bogard, J Linder, AB Rosenberg, G Seelig Cell 178 (1), 91-106. e23, 2019 | 194 | 2019 |
| Spatial and cell type transcriptional landscape of human cerebellar development KA Aldinger, Z Thomson, IG Phelps, P Haldipur, M Deng, AE Timms, ... Nature neuroscience 24 (8), 1163-1175, 2021 | 136 | 2021 |
| A generative neural network for maximizing fitness and diversity of synthetic DNA and protein sequences J Linder, N Bogard, AB Rosenberg, G Seelig Cell systems 11 (1), 49-62. e16, 2020 | 107 | 2020 |
| Combinatorial photo-controlled spatial sequencing and labeling G Seelig, A Kuchina, AB Rosenberg US Patent 10,633,648, 2020 | 80 | 2020 |
| Redefining the etiologic landscape of cerebellar malformations KA Aldinger, AE Timms, Z Thomson, GM Mirzaa, JT Bennett, ... The American Journal of Human Genetics 105 (3), 606-615, 2019 | 79 | 2019 |
| MicroRNA-based single-gene circuits buffer protein synthesis rates against perturbations TJ Strovas, AB Rosenberg, BE Kuypers, RA Muscat, G Seelig ACS synthetic biology 3 (5), 324-331, 2014 | 60 | 2014 |
| A comprehensive analysis of gene expression changes in a high replicate and open-source dataset of differentiating hiPSC-derived cardiomyocytes T Grancharova, KA Gerbin, AB Rosenberg, CM Roco, JE Arakaki, ... Scientific Reports 11 (1), 15845, 2021 | 40 | 2021 |
| Methods and kits for labeling cellular molecules G Seelig, R Muscat, AB Rosenberg US Patent 10,900,065, 2021 | 40 | 2021 |
| SPLiT-seq reveals cell types and lineages in the developing brain and spinal cord AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ... Science (New York, NY) 360 (6385), 176, 2018 | 21 | 2018 |
| High sensitivity single cell RNA sequencing with split pool barcoding V Tran, E Papalexi, S Schroeder, G Kim, A Sapre, J Pangallo, A Sova, ... Biorxiv, 2022.08. 27.505512, 2022 | 17 | 2022 |
| Degenerate minigene library analysis enables identification of altered branch point utilization by mutant splicing factor 3B1 (SF3B1) AK Gupta, T Murthy, KV Paul, O Ramirez, JB Fisher, S Rao, ... Nucleic acids research 47 (2), 970-980, 2019 | 13 | 2019 |
| Deep exploration networks for rapid engineering of functional DNA sequences J Linder, N Bogard, AB Rosenberg, G Seelig BioRxiv, 864363, 2019 | 12 | 2019 |
| Methods and kits for labeling cellular molecules G Seelig, R Muscat, AB Rosenberg US Patent 11,168,355, 2021 | 8 | 2021 |
| Tuning an activator-repressor clock employing retroactivity A Rosenberg, S Jayanthi, D Del Vecchio Proceedings of the 2011 American Control Conference, 2308-2313, 2011 | 8 | 2011 |
| Methods and kits for labeling cellular molecules G Seelig, R Muscat, AB Rosenberg US Patent 11,427,856, 2022 | 7 | 2022 |
| Spatial and single-cell transcriptional landscape of human cerebellar development KA Aldinger, Z Thomson, P Haldipur, M Deng, AE Timms, M Hirano, ... biorxiv, 2020.06. 30.174391, 2020 | 6 | 2020 |
