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Joel Wertheim
Joel Wertheim
University of California San Diego
Bestätigte E-Mail-Adresse bei ucsd.edu
Titel
Zitiert von
Zitiert von
Jahr
Detecting individual sites subject to episodic diversifying selection
B Murrell, JO Wertheim, S Moola, T Weighill, K Scheffler, ...
PLoS genetics 8 (7), e1002764, 2012
16702012
Less is more: an adaptive branch-site random effects model for efficient detection of episodic diversifying selection
MD Smith, JO Wertheim, S Weaver, B Murrell, K Scheffler, ...
Molecular biology and evolution 32 (5), 1342-1353, 2015
6912015
RELAX: detecting relaxed selection in a phylogenetic framework
JO Wertheim, B Murrell, MD Smith, SL Kosakovsky Pond, K Scheffler
Molecular biology and evolution 32 (3), 820-832, 2015
628*2015
The origins of SARS-CoV-2: A critical review
EC Holmes, SA Goldstein, AL Rasmussen, DL Robertson, ...
Cell 184 (19), 4848-4856, 2021
6052021
Gene-wide identification of episodic selection
B Murrell, S Weaver, MD Smith, JO Wertheim, S Murrell, A Aylward, ...
Molecular biology and evolution 32 (5), 1365-1371, 2015
5462015
The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic
M Worobey, JI Levy, L Malpica Serrano, A Crits-Christoph, JE Pekar, ...
Science 377 (6609), 951-959, 2022
462*2022
The Emergence of SARS-CoV-2 in Europe and North America
M Worobey, J Pekar, BB Larsen, MI Nelson, V Hill, JB Joy, A Rambaut, ...
Science 370 (6516), 564-570, 2020
4382020
A case for the ancient origin of coronaviruses
JO Wertheim, DKW Chu, JSM Peiris, SL Kosakovsky Pond, LLM Poon
Journal of Virology 87 (12), 7039-7045, 2013
380*2013
The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages
DP Martin, S Weaver, H Tegally, JE San, SD Shank, E Wilkinson, ...
Cell 184 (20), 5189-5200. e7, 2021
2812021
The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2
JE Pekar, A Magee, E Parker, N Moshiri, K Izhikevich, JL Havens, ...
Science 377 (6609), 960-966, 2022
270*2022
Dating the age of the SIV lineages that gave rise to HIV-1 and HIV-2
JO Wertheim, M Worobey
PLoS computational biology 5 (5), e1000377, 2009
2682009
The global transmission network of HIV-1
JO Wertheim, AJ Leigh Brown, NL Hepler, SR Mehta, DD Richman, ...
The Journal of infectious diseases 209 (2), 304-313, 2014
2512014
HIV-TRACE (TRAnsmission Cluster Engine): a tool for large scale molecular epidemiology of HIV-1 and other rapidly evolving pathogens
SL Kosakovsky Pond, S Weaver, AJ Leigh Brown, JO Wertheim
Molecular biology and evolution 35 (7), 1812-1819, 2018
2492018
Using HIV networks to inform real time prevention interventions
SJ Little, SL Kosakovsky Pond, CM Anderson, JA Young, JO Wertheim, ...
PloS one 9 (6), e98443, 2014
2212014
Purifying selection can obscure the ancient age of viral lineages
JO Wertheim, SL Kosakovsky Pond
Molecular biology and evolution 28 (12), 3355-3365, 2011
2142011
Social and genetic networks of HIV-1 transmission in New York City
JO Wertheim, SL Kosakovsky Pond, LA Forgione, SR Mehta, B Murrell, ...
PLoS pathogens 13 (1), e1006000, 2017
209*2017
Timing the SARS-CoV-2 index case in Hubei province
J Pekar, M Worobey, N Moshiri, K Scheffler, JO Wertheim
Science 372 (6540), 412-417, 2021
2072021
Evolutionary origins of human herpes simplex viruses 1 and 2
JO Wertheim, MD Smith, DM Smith, K Scheffler, SL Kosakovsky Pond
Mol. Biol. Evol 31, 2356-2364, 2014
1842014
Using molecular HIV surveillance data to understand transmission between subpopulations in the United States
AM Oster, JO Wertheim, AL Hernandez, MCB Ocfemia, N Saduvala, ...
JAIDS Journal of Acquired Immune Deficiency Syndromes 70 (4), 444-451, 2015
1742015
Identifying clusters of recent and rapid HIV transmission through analysis of molecular surveillance data
AM Oster, AM France, N Panneer, MCB Ocfemia, E Campbell, ...
JAIDS Journal of Acquired Immune Deficiency Syndromes 79 (5), 543-550, 2018
1452018
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