| Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017 | 3606 | 2017 |
| Tumor microbiome diversity and composition influence pancreatic cancer outcomes E Riquelme, Y Zhang, L Zhang, M Montiel, M Zoltan, W Dong, P Quesada, ... Cell 178 (4), 795-806. e12, 2019 | 1259 | 2019 |
| Dietary fiber and probiotics influence the gut microbiome and melanoma immunotherapy response CN Spencer, JL McQuade, V Gopalakrishnan, JA McCulloch, M Vetizou, ... Science 374 (6575), 1632-1640, 2021 | 583 | 2021 |
| Bayesian inference of multiple Gaussian graphical models C Peterson, FC Stingo, M Vannucci Journal of the American Statistical Association 110 (509), 159-174, 2015 | 233 | 2015 |
| Co-expression networks reveal the tissue-specific regulation of transcription and splicing A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ... Genome research 27 (11), 1843-1858, 2017 | 184 | 2017 |
| PBRM1 loss defines a nonimmunogenic tumor phenotype associated with checkpoint inhibitor resistance in renal carcinoma XD Liu, W Kong, CB Peterson, DJ McGrail, A Hoang, X Zhang, T Lam, ... Nature Communications 11 (1), 1-14, 2020 | 168 | 2020 |
| Controlling the rate of GWAS false discoveries CS D Brzyski, CB Peterson, P Sobczyk, E Candes, M Bogdan Genetics 205 (1), 61-75, 2017 | 155 | 2017 |
| Safety and preliminary efficacy of orally administered lyophilized fecal microbiota product compared with frozen product given by enema for recurrent Clostridium difficile … ZD Jiang, RR Jenq, NJ Ajami, JF Petrosino, AA Alexander, S Ke, T Iqbal, ... PLoS One 13 (11), e0205064, 2018 | 144 | 2018 |
| Automatic detection of contouring errors using convolutional neural networks DJ Rhee, CE Cardenas, H Elhalawani, R McCarroll, L Zhang, J Yang, ... Medical physics 46 (11), 5086-5097, 2019 | 103 | 2019 |
| Gut microbiome signatures are predictive of infectious risk following induction therapy for acute myeloid leukemia JR Galloway-Peña, Y Shi, CB Peterson, P Sahasrabhojane, ... Clinical Infectious Diseases 71 (1), 63-71, 2020 | 92 | 2020 |
| Lung tumor segmentation methods: Impact on the uncertainty of radiomics features for non-small cell lung cancer CA Owens, CB Peterson, C Tang, EJ Koay, W Yu, DS Mackin, J Li, ... PloS one 13 (10), e0205003, 2018 | 90 | 2018 |
| Automatic segmentation using deep learning to enable online dose optimization during adaptive radiation therapy of Cervical Cancer B Rigaud, BM Anderson, HY Zhiqian, M Gobeli, G Cazoulat, J Söderberg, ... International Journal of Radiation Oncology* Biology* Physics 109 (4), 1096-1110, 2021 | 82 | 2021 |
| Many phenotypes without many false discoveries: error controlling strategies for multi-trait association studies C Peterson, M Bogomolov, Y Benjamini, C Sabatti Genetic Epidemiology 40 (1), 45-56, 2016 | 80 | 2016 |
| Caveolin-1-mediated sphingolipid oncometabolism underlies a metabolic vulnerability of prostate cancer J Vykoukal, JF Fahrmann, JR Gregg, Z Tang, S Basourakos, E Irajizad, ... Nature communications 11 (1), 4279, 2020 | 74 | 2020 |
| Minimal residual disease undetectable by next-generation sequencing predicts improved outcome in CLL after chemoimmunotherapy PA Thompson, J Srivastava, C Peterson, P Strati, JL Jorgensen, T Hether, ... Blood 134 (22), 1951-1959, 2019 | 73 | 2019 |
| Local genetic effects on gene expression across 44 human tissues F Aguet, AA Brown, S Castel, JR Davis, P Mohammadi, AV Segre, ... BiorXiv, 074450, 2016 | 72 | 2016 |
| Extracellular vesicle PD-L1 dynamics predict durable response to immune-checkpoint inhibitors and survival in patients with non-small cell lung cancer D de Miguel-Perez, A Russo, O Arrieta, M Ak, F Barron, M Gunasekaran, ... Journal of Experimental & Clinical Cancer Research 41 (1), 186, 2022 | 66 | 2022 |
| Retrospective validation and clinical implementation of automated contouring of organs at risk in the head and neck: a step toward automated radiation treatment planning for … RE McCarroll, BM Beadle, PA Balter, H Burger, CE Cardenas, S Dalvie, ... Journal of Global Oncology 4, 1-11, 2018 | 62 | 2018 |
| Radiation planning assistant-a streamlined, fully automated radiotherapy treatment planning system K Kisling, R McCarroll, L Zhang, J Yang, H Simonds, M du Toit, ... JoVE (Journal of Visualized Experiments), e57411, 2018 | 59 | 2018 |
| Association between plasma diacetylspermine and tumor spermine synthase with outcome in triple-negative breast cancer JF Fahrmann, J Vykoukal, A Fleury, S Tripathi, JB Dennison, E Murage, ... JNCI: Journal of the National Cancer Institute 112 (6), 607-616, 2020 | 58 | 2020 |
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