| Phylogenies and community ecology CO Webb, DD Ackerly, MA McPeek, MJ Donoghue Annual review of ecology and systematics 33 (1), 475-505, 2002 | 5070 | 2002 |
| Plant systematics: a phylogenetic approach WS Judd, CS Campbell, EA Kellogg, PF Stevens, MJ Donoghue Ecología mediterránea 25 (2), 215, 1999 | 4338 | 1999 |
| The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny BG Baldwin, MJ Sanderson, JM Porter, MF Wojciechowski, CS Campbell, ... Annals of the Missouri botanical garden, 247-277, 1995 | 2875 | 1995 |
| Historical biogeography, ecology and species richness JJ Wiens, MJ Donoghue Trends in ecology & evolution 19 (12), 639-644, 2004 | 2122 | 2004 |
| Outgroup analysis and parsimony WP Maddison, MJ Donoghue, DR Maddison Systematic biology 33 (1), 83-103, 1984 | 1633 | 1984 |
| Cerivastatin inhibits proliferation of interleukin-1β-induced rat mesangial cells by enhanced formation of nitric oxide C Blume, D Sabuda-Widemann, J Pfeilschifter, J Plum, K Schrör, ... European journal of pharmacology 485 (1-3), 1-10, 2004 | 1546 | 2004 |
| Phylomatic: tree assembly for applied phylogenetics CO Webb, MJ Donoghue Molecular ecology notes 5 (1), 181-183, 2005 | 1191 | 2005 |
| A likelihood framework for inferring the evolution of geographic range on phylogenetic trees RH Ree, BR Moore, CO Webb, MJ Donoghue Evolution 59 (11), 2299-2311, 2005 | 956 | 2005 |
| Sistemática Vegetal-: Um Enfoque Filogenético WS Judd, CS Campbell, EA Kellogg, PF Stevens, MJ Donoghue Artmed Editora, 2009 | 934 | 2009 |
| Phylogenetic relationships of Dipsacales based on rbcL sequences MJ Donoghue, RG Olmstead, JF Smith, JD Palmer Annals of the Missouri Botanical Garden, 333-345, 1992 | 895 | 1992 |
| Patterns of variation in levels of homoplasy MJ Sanderson, MJ Donoghue Evolution 43 (8), 1781-1795, 1989 | 803 | 1989 |
| Rates of molecular evolution are linked to life history in flowering plants SA Smith, MJ Donoghue science 322 (5898), 86-89, 2008 | 800 | 2008 |
| A phylogenetic perspective on the distribution of plant diversity MJ Donoghue Proceedings of the National Academy of Sciences 105 (supplement_1), 11549-11555, 2008 | 771 | 2008 |
| A critique of the biological species concept and recommendations for a phylogenetic alternative MJ Donoghue Bryologist, 172-181, 1985 | 759 | 1985 |
| Angiosperm phylogeny: 17 genes, 640 taxa DE Soltis, SA Smith, N Cellinese, KJ Wurdack, DC Tank, SF Brockington, ... American journal of botany 98 (4), 704-730, 2011 | 751 | 2011 |
| Functional traits, the phylogeny of function, and ecosystem service vulnerability S Díaz, A Purvis, JHC Cornelissen, GM Mace, MJ Donoghue, RM Ewers, ... Ecology and evolution 3 (9), 2958-2975, 2013 | 722 | 2013 |
| Seed plant phylogeny and the origin of angiosperms: an experimental cladistic approach JA Doyle, MJ Donoghue The Botanical Review 52, 321-431, 1986 | 699 | 1986 |
| Separate versus combined analysis of phylogenetic evidence A de Queiroz, MJ Donoghue, J Kim Annual Review of Ecology and Systematics, 657-681, 1995 | 686 | 1995 |
| Species concepts: a case for pluralism BD Mishler, MJ Donoghue Systematic zoology 31 (4), 491-503, 1982 | 672 | 1982 |
| The importance of fossils in phylogeny reconstruction MJ Donoghue, JA Doyle, J Gauthier, AG Kluge, T Rowe Annual review of Ecology and Systematics, 431-460, 1989 | 601 | 1989 |
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