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Philip Sweet
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A small RNA regulates pprM, a modulator of pleiotropic proteins promoting DNA repair, in Deinococcus radiodurans under ionizing radiation
JK Villa, R Han, CH Tsai, A Chen, P Sweet, G Franco, R Vaezian, R Tkavc, ...
Scientific reports 11 (1), 12949, 2021
202021
Familial deletion of the HOXA gene cluster associated with Hand–Foot–Genital syndrome and phenotypic variability
E Tas, J Sebastian, S Madan‐Khetarpal, P Sweet, AN Yatsenko, ...
American Journal of Medical Genetics Part A 173 (1), 221-224, 2017
92017
Genomic testing for copy number and single nucleotide variants in spermatogenic failure
J Hardy, N Pollock, T Gingrich, P Sweet, A Ramesh, J Kuong, A Basar, ...
Journal of Assisted Reproduction and Genetics 39 (9), 2103-2114, 2022
52022
Exposure of Shewanella oneidensis MR-1 to Sublethal Doses of Ionizing Radiation Triggers Short-Term SOS Activation and Longer-Term Prophage Activation
P Sweet, J Blacutt, V Gordon, L Contreras
Applied and Environmental Microbiology 89 (3), e01716-22, 2023
42023
TolRad, a model for predicting radiation tolerance using Pfam annotations, identifies novel radiosensitive bacterial species from reference genomes and MAGs
P Sweet, M Burroughs, S Jang, L Contreras
Microbiology Spectrum 12 (10), e03838-23, 2024
22024
Geometric changes in the nucleoids of Deinococcus radiodurans reveal involvement of new proteins in recovery from ionizing radiation.
A Cordova, B Niese, P Sweet, P Kamat, JM Phillip, V Gordon, ...
bioRxiv, 2024.01. 17.576117, 2024
12024
Optimized chemical labeling method for isolation of 8-oxoG-modified RNA, ChLoRox-Seq, identifies mRNAs enriched in oxidation and transcriptome-wide distribution biases of …
MR Burroughs, PJ Sweet, LM Contreras
RNA biology 21 (1), 132-148, 2024
2024
Quantitative morphological analysis of Deinococcus radiodurans elucidates complex dose-dependent nucleoid condensation during recovery from ionizing radiation
A Cordova, B Niese, P Sweet, P Kamat, JM Phillip, V Gordon, ...
Applied and Environmental Microbiology, e00108-24, 2024
2024
Geometric properties of Deinococcus radiodurans cells and nucleoids reflect effects of radiation exposure or the deletion of key genome-associated proteins
V Gordon, A Cordova, B Niese, P Sweet, L Contreras
Bulletin of the American Physical Society, 2024
2024
Tracking Air Pollution Induced RNA Oxidation Using an Improved Biochemical Methodology
M Burroughs, P Sweet, N Sherwani, L Contreras
2023 AIChE Annual Meeting, 2023
2023
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