A small RNA regulates pprM, a modulator of pleiotropic proteins promoting DNA repair, in Deinococcus radiodurans under ionizing radiation JK Villa, R Han, CH Tsai, A Chen, P Sweet, G Franco, R Vaezian, R Tkavc, ... Scientific reports 11 (1), 12949, 2021 | 20 | 2021 |
Familial deletion of the HOXA gene cluster associated with Hand–Foot–Genital syndrome and phenotypic variability E Tas, J Sebastian, S Madan‐Khetarpal, P Sweet, AN Yatsenko, ... American Journal of Medical Genetics Part A 173 (1), 221-224, 2017 | 9 | 2017 |
Genomic testing for copy number and single nucleotide variants in spermatogenic failure J Hardy, N Pollock, T Gingrich, P Sweet, A Ramesh, J Kuong, A Basar, ... Journal of Assisted Reproduction and Genetics 39 (9), 2103-2114, 2022 | 5 | 2022 |
Exposure of Shewanella oneidensis MR-1 to Sublethal Doses of Ionizing Radiation Triggers Short-Term SOS Activation and Longer-Term Prophage Activation P Sweet, J Blacutt, V Gordon, L Contreras Applied and Environmental Microbiology 89 (3), e01716-22, 2023 | 4 | 2023 |
TolRad, a model for predicting radiation tolerance using Pfam annotations, identifies novel radiosensitive bacterial species from reference genomes and MAGs P Sweet, M Burroughs, S Jang, L Contreras Microbiology Spectrum 12 (10), e03838-23, 2024 | 2 | 2024 |
Geometric changes in the nucleoids of Deinococcus radiodurans reveal involvement of new proteins in recovery from ionizing radiation. A Cordova, B Niese, P Sweet, P Kamat, JM Phillip, V Gordon, ... bioRxiv, 2024.01. 17.576117, 2024 | 1 | 2024 |
Optimized chemical labeling method for isolation of 8-oxoG-modified RNA, ChLoRox-Seq, identifies mRNAs enriched in oxidation and transcriptome-wide distribution biases of … MR Burroughs, PJ Sweet, LM Contreras RNA biology 21 (1), 132-148, 2024 | | 2024 |
Quantitative morphological analysis of Deinococcus radiodurans elucidates complex dose-dependent nucleoid condensation during recovery from ionizing radiation A Cordova, B Niese, P Sweet, P Kamat, JM Phillip, V Gordon, ... Applied and Environmental Microbiology, e00108-24, 2024 | | 2024 |
Geometric properties of Deinococcus radiodurans cells and nucleoids reflect effects of radiation exposure or the deletion of key genome-associated proteins V Gordon, A Cordova, B Niese, P Sweet, L Contreras Bulletin of the American Physical Society, 2024 | | 2024 |
Tracking Air Pollution Induced RNA Oxidation Using an Improved Biochemical Methodology M Burroughs, P Sweet, N Sherwani, L Contreras 2023 AIChE Annual Meeting, 2023 | | 2023 |