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Chris Creevey
Chris Creevey
Professor of Computational Biology, Queen’s University Belfast
Bestätigte E-Mail-Adresse bei qub.ac.uk - Startseite
Titel
Zitiert von
Zitiert von
Jahr
STRING 8—a global view on proteins and their functional interactions in 630 organisms
LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ...
Nucleic acids research 37 (suppl_1), D412-D416, 2009
29652009
Toward automatic reconstruction of a highly resolved tree of life
FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork
Science 311 (5765), 1283, 2006
18672006
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
T Keane, C Creevey, M Pentony, T Naughton, J Mclnerney
BMC evolutionary biology 6 (1), 29, 2006
12182006
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
6422014
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ...
Nature biotechnology 36 (4), 359-367, 2018
5372018
Genome-wide experimental determination of barriers to horizontal gene transfer
R Sorek, Y Zhu, CJ Creevey, MP Francino, P Bork, EM Rubin
Science 318 (5855), 1449, 2007
4882007
Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future
SA Huws, CJ Creevey, LB Oyama, I Mizrahi, SE Denman, M Popova, ...
Frontiers in microbiology 9, 2161, 2018
4192018
Clann: investigating phylogenetic information through supertree analyses
CJ Creevey, JO McInerney
Bioinformatics 21 (3), 390-392, 2005
2322005
Determining the culturability of the rumen bacterial microbiome
CJ Creevey, WJ Kelly, G Henderson, SC Leahy
Microbial biotechnology 7 (5), 467-479, 2014
2302014
Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle
F Li, TCA Hitch, Y Chen, CJ Creevey, LL Guan
Microbiome 7, 1-21, 2019
2262019
Genome phylogenies indicate a meaningful α-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales
DA Fitzpatrick, CJ Creevey, JO McInerney
Molecular biology and evolution 23 (1), 74-85, 2006
1822006
CowPI: a rumen microbiome focussed version of the PICRUSt functional inference software
TJ Wilkinson, SA Huws, JE Edwards, AH Kingston-Smith, K Siu-Ting, ...
Frontiers in microbiology 9, 1095, 2018
1622018
The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata …
GK Philip, CJ Creevey, JO McInerney
Molecular biology and evolution 22 (5), 1175-1184, 2005
1552005
Does a tree–like phylogeny only exist at the tips in the prokaryotes?
CJ Creevey, DA Fitzpatrick, GK Philip, RJ Kinsella, MJ O'Connell, ...
Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004
1492004
RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance
M McCabe, S Waters, D Morris, D Kenny, D Lynn, C Creevey
BMC genomics 13, 1-11, 2012
1322012
The shape of supertrees to come: tree shape related properties of fourteen supertree methods
M Wilkinson, JA Cotton, C Creevey, O Eulenstein, SR Harris, FJ Lapointe, ...
Systematic biology 54 (3), 419-431, 2005
1262005
Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass
SA Huws, JE Edwards, CJ Creevey, P Rees Stevens, W Lin, SE Girdwood, ...
FEMS Microbiology Ecology 92 (1), fiv137, 2016
1252016
Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication
RJ Kinsella, DA Fitzpatrick, CJ Creevey, JO McInerney
Proceedings of the National Academy of Sciences 100 (18), 10320, 2003
1242003
Visualization of multiple alignments, phylogenies and gene family evolution
JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton
Nature methods 7 (Suppl 3), S16-S25, 2010
1182010
Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type
CA Carberry, SM Waters, DA Kenny, CJ Creevey
Applied and environmental microbiology 80 (2), 586-594, 2014
1122014
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