| The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants SA Rensing, D Lang, AD Zimmer, A Terry, A Salamov, H Shapiro, ... Science 319 (5859), 64-69, 2008 | 2082 | 2008 |
| The Selaginella genome identifies genetic changes associated with the evolution of vascular plants JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ... science 332 (6032), 960-963, 2011 | 923 | 2011 |
| TCC: an R package for comparing tag count data with robust normalization strategies J Sun, T Nishiyama, K Shimizu, K Kadota BMC bioinformatics 14, 1-14, 2013 | 578 | 2013 |
| The Chara genome: secondary complexity and implications for plant terrestrialization T Nishiyama, H Sakayama, J De Vries, H Buschmann, D Saint-Marcoux, ... Cell 174 (2), 448-464. e24, 2018 | 501 | 2018 |
| Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: Implication for land plant evolution T Nishiyama, T Fujita, T Shin-I, M Seki, H Nishide, I Uchiyama, A Kamiya, ... Proceedings of the National Academy of Sciences 100 (13), 8007-8012, 2003 | 409 | 2003 |
| Tagged mutagenesis and gene-trap in the moss, Physcomitrella patens by shuttle mutagenesis T Nishiyama, Y Hiwatashi, K Sakakibara, M Kato, M Hasebe DNA research 7 (1), 9-17, 2000 | 364 | 2000 |
| Algal ancestor of land plants was preadapted for symbiosis PM Delaux, GV Radhakrishnan, D Jayaraman, J Cheema, M Malbreil, ... Proceedings of the National Academy of Sciences 112 (43), 13390-13395, 2015 | 358 | 2015 |
| Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts FW Li, T Nishiyama, M Waller, E Frangedakis, J Keller, Z Li, ... Nature plants 6 (3), 259-272, 2020 | 298 | 2020 |
| A membrane trafficking pathway regulated by the plant-specific RAB GTPase ARA6 K Ebine, M Fujimoto, Y Okatani, T Nishiyama, T Goh, E Ito, T Dainobu, ... Nature cell biology 13 (7), 853-859, 2011 | 287 | 2011 |
| The GID1-Mediated Gibberellin Perception Mechanism Is Conserved in the Lycophyte Selaginella moellendorffii but Not in the Bryophyte Physcomitrella patens K Hirano, M Nakajima, K Asano, T Nishiyama, H Sakakibara, M Kojima, ... The Plant Cell 19 (10), 3058-3079, 2007 | 243 | 2007 |
| Class 1 KNOX genes are not involved in shoot development in the moss Physcomitrella patens but do function in sporophyte development K Sakakibara, T Nishiyama, H Deguchi, M Hasebe Evolution & Development 10 (5), 555-566, 2008 | 206 | 2008 |
| Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene … AD Zimmer, D Lang, K Buchta, S Rombauts, T Nishiyama, M Hasebe, ... BMC genomics 14, 1-20, 2013 | 197 | 2013 |
| Involvement of auxin and a homeodomain-leucine zipper I gene in rhizoid development of the moss Physcomitrella patens K Sakakibara, T Nishiyama, N Sumikawa, R Kofuji, T Murata, M Hasebe Oxford University Press for The Company of Biologists Limited 130 (20), 4835 …, 2003 | 163 | 2003 |
| Chloroplast phylogeny indicates that bryophytes are monophyletic T Nishiyama, PG Wolf, M Kugita, RB Sinclair, M Sugita, C Sugiura, ... Molecular Biology and Evolution 21 (10), 1813-1819, 2004 | 158 | 2004 |
| WOX13-like genes are required for reprogramming of leaf and protoplast cells into stem cells in the moss Physcomitrella patens K Sakakibara, P Reisewitz, T Aoyama, T Friedrich, S Ando, Y Sato, ... Development 141 (8), 1660-1670, 2014 | 153 | 2014 |
| A polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution Y Okano, N Aono, Y Hiwatashi, T Murata, T Nishiyama, T Ishikawa, ... Proceedings of the National Academy of Sciences 106 (38), 16321-16326, 2009 | 153 | 2009 |
| Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge O Gusev, Y Suetsugu, R Cornette, T Kawashima, MD Logacheva, ... Nature communications 5 (1), 4784, 2014 | 152 | 2014 |
| Characterization of MADS-box genes in charophycean green algae and its implication for the evolution of MADS-box genes Y Tanabe, M Hasebe, H Sekimoto, T Nishiyama, M Kitani, K Henschel, ... Proceedings of the National Academy of Sciences 102 (7), 2436-2441, 2005 | 140 | 2005 |
| Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory K Fukushima, X Fang, D Alvarez-Ponce, H Cai, L Carretero-Paulet, ... Nature Ecology & Evolution 1 (3), 0059, 2017 | 131 | 2017 |
| Physcomitrella Cyclin-Dependent Kinase A Links Cell Cycle Reactivation to Other Cellular Changes during Reprogramming of Leaf Cells M Ishikawa, T Murata, Y Sato, T Nishiyama, Y Hiwatashi, A Imai, M Kimura, ... The Plant Cell 23 (8), 2924-2938, 2011 | 130 | 2011 |
