Joel Wertheim

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Sergei L Kosakovsky PondProfessor of Biology, Institute for Genomics and Evolutionary Medicine, Temple UniversityVerificeret mail på temple.edu
Ben MurrellDepartment of Microbiology, Tumor and Cell Biology, Karolinska InstitutetVerificeret mail på ki.se
Michael WorobeyProfessorVerificeret mail på email.arizona.edu
Davey SmithProfessor of Medicine, University of California, San DiegoVerificeret mail på ucsd.edu
Konrad SchefflerIlluminaVerificeret mail på illumina.com
Marc A. SuchardProfessor, University of California, Los AngelesVerificeret mail på ucla.edu
Steven WeaverInstitute for Genomics and Evolutionary Medicine, Temple UniversityVerificeret mail på temple.edu
Susan LittleUniversity of California San DiegoVerificeret mail på health.ucsd.edu
Martin D SmithSoftware Developer, Pacific Biosciences of CaliforniaVerificeret mail på pacificbiosciences.com
Kristian G AndersenThe Scripps Research InstituteVerificeret mail på scripps.edu
Tetyana VasylyevaAssistant Professor, University of California IrvineVerificeret mail på uci.edu
Manon Ragonnet-CroninUniversity of ChicagoVerificeret mail på uchicago.edu
Niema MoshiriAssociate Teaching Professor, University of California, San DiegoVerificeret mail på ucsd.edu
Sara Gianella WeibelAssociate Professor of Medicine, University of California San DiegoVerificeret mail på ucsd.edu
Michael J. SandersonProfessor of Ecology and Evolutionary Biology, University of ArizonaVerificeret mail på email.arizona.edu
Kemal ErenUniversity of San Diego, CAVerificeret mail på eng.ucsd.edu
Emma B HodcroftAssistant Professor, Swiss Tropical and Public Health Institute, University of BaselVerificeret mail på unibas.ch
Frederick M. CohanDepartment of Biology, Wesleyan UniversityVerificeret mail på WESLEYAN.EDU
Mathieu FourmentUniversity of Technology SydneyVerificeret mail på uts.edu.au

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Joel Wertheim

University of California San Diego

Verificeret mail på ucsd.edu

Evolutionary Biology Molecular Epidemiology


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Detecting individual sites subject to episodic diversifying selection B Murrell, JO Wertheim, S Moola, T Weighill, K Scheffler, ... PLoS genetics 8 (7), e1002764, 2012	1672	2012
Less is more: an adaptive branch-site random effects model for efficient detection of episodic diversifying selection MD Smith, JO Wertheim, S Weaver, B Murrell, K Scheffler, ... Molecular biology and evolution 32 (5), 1342-1353, 2015	691	2015
RELAX: detecting relaxed selection in a phylogenetic framework JO Wertheim, B Murrell, MD Smith, SL Kosakovsky Pond, K Scheffler Molecular biology and evolution 32 (3), 820-832, 2015	628*	2015
The origins of SARS-CoV-2: A critical review EC Holmes, SA Goldstein, AL Rasmussen, DL Robertson, ... Cell 184 (19), 4848-4856, 2021	605	2021
Gene-wide identification of episodic selection B Murrell, S Weaver, MD Smith, JO Wertheim, S Murrell, A Aylward, ... Molecular biology and evolution 32 (5), 1365-1371, 2015	546	2015
The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic M Worobey, JI Levy, L Malpica Serrano, A Crits-Christoph, JE Pekar, ... Science 377 (6609), 951-959, 2022	461*	2022
The Emergence of SARS-CoV-2 in Europe and North America M Worobey, J Pekar, BB Larsen, MI Nelson, V Hill, JB Joy, A Rambaut, ... Science 370 (6516), 564-570, 2020	440	2020
A case for the ancient origin of coronaviruses JO Wertheim, DKW Chu, JSM Peiris, SL Kosakovsky Pond, LLM Poon Journal of Virology 87 (12), 7039-7045, 2013	380*	2013
The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages DP Martin, S Weaver, H Tegally, JE San, SD Shank, E Wilkinson, ... Cell 184 (20), 5189-5200. e7, 2021	281	2021
The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2 JE Pekar, A Magee, E Parker, N Moshiri, K Izhikevich, JL Havens, ... Science 377 (6609), 960-966, 2022	270*	2022
Dating the age of the SIV lineages that gave rise to HIV-1 and HIV-2 JO Wertheim, M Worobey PLoS computational biology 5 (5), e1000377, 2009	268	2009
The global transmission network of HIV-1 JO Wertheim, AJ Leigh Brown, NL Hepler, SR Mehta, DD Richman, ... The Journal of infectious diseases 209 (2), 304-313, 2014	251	2014
HIV-TRACE (TRAnsmission Cluster Engine): a tool for large scale molecular epidemiology of HIV-1 and other rapidly evolving pathogens SL Kosakovsky Pond, S Weaver, AJ Leigh Brown, JO Wertheim Molecular biology and evolution 35 (7), 1812-1819, 2018	249	2018
Using HIV networks to inform real time prevention interventions SJ Little, SL Kosakovsky Pond, CM Anderson, JA Young, JO Wertheim, ... PloS one 9 (6), e98443, 2014	221	2014
Purifying selection can obscure the ancient age of viral lineages JO Wertheim, SL Kosakovsky Pond Molecular biology and evolution 28 (12), 3355-3365, 2011	214	2011
Social and genetic networks of HIV-1 transmission in New York City JO Wertheim, SL Kosakovsky Pond, LA Forgione, SR Mehta, B Murrell, ... PLoS pathogens 13 (1), e1006000, 2017	209*	2017
Timing the SARS-CoV-2 index case in Hubei province J Pekar, M Worobey, N Moshiri, K Scheffler, JO Wertheim Science 372 (6540), 412-417, 2021	207	2021
Evolutionary origins of human herpes simplex viruses 1 and 2 JO Wertheim, MD Smith, DM Smith, K Scheffler, SL Kosakovsky Pond Mol. Biol. Evol 31, 2356-2364, 2014	184	2014
Using molecular HIV surveillance data to understand transmission between subpopulations in the United States AM Oster, JO Wertheim, AL Hernandez, MCB Ocfemia, N Saduvala, ... JAIDS Journal of Acquired Immune Deficiency Syndromes 70 (4), 444-451, 2015	174	2015
Identifying clusters of recent and rapid HIV transmission through analysis of molecular surveillance data AM Oster, AM France, N Panneer, MCB Ocfemia, E Campbell, ... JAIDS Journal of Acquired Immune Deficiency Syndromes 79 (5), 543-550, 2018	145	2018

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