متابعة
Gustavo Sacomoto
Gustavo Sacomoto
Post-Doc Researcher INRIA (Lyon, France)
بريد إلكتروني تم التحقق منه على inria.fr
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data‏
GAT Sacomoto, J Kielbassa, R Chikhi, R Uricaru, P Antoniou, MF Sagot, ...‏
BMC bioinformatics 13, 1-12, 2012‏
1342012
Optimal listing of cycles and st-paths in undirected graphs‏
E Birmelé, R Ferreira, R Grossi, A Marino, N Pisanti, R Rizzi, G Sacomoto‏
Proceedings of the twenty-fourth annual ACM-SIAM symposium on Discrete …, 2013‏
1222013
Using cascading Bloom filters to improve the memory usage for de Brujin graphs‏
K Salikhov, G Sacomoto, G Kucherov‏
Algorithms for Molecular Biology 9, 1-10, 2014‏
872014
Using cascading Bloom filters to improve the memory usage for de Brujin graphs‏
K Salikhov, G Sacomoto, G Kucherov‏
International Workshop on Algorithms in Bioinformatics, 364-376, 2013‏
632013
Complementarity of assembly-first and mapping-first approaches for alternative splicing annotation and differential analysis from RNAseq data‏
C Benoit-Pilven, C Marchet, E Chautard, L Lima, MP Lambert, ...‏
Scientific reports 8 (1), 4307, 2018‏
442018
Efficiently Listing Bounded Length st-Paths‏
R Rizzi, G Sacomoto, MF Sagot‏
International Workshop on Combinatorial Algorithms, 318-329, 2014‏
372014
Lossless filter for multiple repeats with bounded edit distance‏
P Peterlongo, GAT Sacomoto, AP Do Lago, N Pisanti, MF Sagot‏
Algorithms for Molecular Biology 4, 1-20, 2009‏
292009
Computing and Listing st-Paths in Public Transportation Networks‏
K Böhmová, L Häfliger, M Mihalák, T Pröger, G Sacomoto, MF Sagot‏
Theory of Computing Systems 62, 600-621, 2018‏
282018
Amortized-delay algorithm for listing chordless cycles in undirected graphs‏
R Ferreira, R Grossi, R Rizzi, G Sacomoto, MF Sagot‏
European Symposium on Algorithms, 418-429, 2014‏
282014
Efficient bubble enumeration in directed graphs‏
E Birmelé, P Crescenzi, R Ferreira, R Grossi, V Lacroix, A Marino, ...‏
String Processing and Information Retrieval: 19th International Symposium …, 2012‏
272012
Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads‏
L Lima, B Sinaimeri, G Sacomoto, H Lopez-Maestre, C Marchet, V Miele, ...‏
Algorithms for molecular biology 12, 1-19, 2017‏
252017
A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data‏
G Sacomoto, V Lacroix, MF Sagot‏
International Workshop on Algorithms in Bioinformatics, 99-111, 2013‏
132013
Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads‏
Y Le Bras, O Collin, C Monjeaud, V Lacroix, É Rivals, C Lemaitre, V Miele, ...‏
GigaScience 5 (1), s13742-015-0105-2, 2016‏
112016
On bubble generators in directed graphs‏
V Acuna, R Grossi, GF Italiano, L Lima, R Rizzi, G Sacomoto, MF Sagot, ...‏
Graph-Theoretic Concepts in Computer Science: 43rd International Workshop …, 2017‏
102017
Navigating in a sea of repeats in rna-seq without drowning‏
G Sacomoto, B Sinaimeri, C Marchet, V Miele, MF Sagot, V Lacroix‏
International Workshop on Algorithms in Bioinformatics, 82-96, 2014‏
72014
Algorithms in Bioinformatics‏
K Salikhov, G Sacomoto, G Kucherov‏
Springer, 2013‏
62013
Complementarity of assembly-first and mapping-first approaches for alternative splicing annotation and differential analysis from RNAseq data. Sci Rep 8: 4307‏
C Benoit-Pilven, C Marchet, E Chautard, L Lima, MP Lambert, ...‏
42018
Superstring Graph: a new approach for genome assembly‏
B Cazaux, G Sacomoto, E Rivals‏
Algorithmic Aspects in Information and Management: 11th International …, 2016‏
42016
On bubble generators in directed graphs‏
V Acuña, R Grossi, GF Italiano, L Lima, R Rizzi, G Sacomoto, MF Sagot, ...‏
Algorithmica 82, 898-914, 2020‏
32020
Efficient algorithms for de novo assembly of alternative splicing events from RNA-seq data‏
G Sacomoto‏
arXiv preprint arXiv:1406.6047, 2014‏
32014
يتعذر على النظام إجراء العملية في الوقت الحالي. عاود المحاولة لاحقًا.
مقالات 1–20