متابعة
Jue Ruan
Jue Ruan
Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
بريد إلكتروني تم التحقق منه على caas.cn
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
The sequence alignment/map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
bioinformatics 25 (16), 2078-2079, 2009
573092009
1000 genome project data processing subgroup. The sequence alignment/map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
Bioinformatics 25 (16), 2078-2079, 2009
117442009
Mapping short DNA sequencing reads and calling variants using mapping quality scores
H Li, J Ruan, R Durbin
Genome research 18 (11), 1851-1858, 2008
35522008
De novo assembly of human genomes with massively parallel short read sequencing
R Li, H Zhu, J Ruan, W Qian, X Fang, Z Shi, Y Li, S Li, G Shan, ...
Genome research 20 (2), 265-272, 2010
33592010
The genome of the cucumber, Cucumis sativus L.
S Huang, R Li, Z Zhang, LI Li, X Gu, W Fan, WJ Lucas, X Wang, B Xie, ...
Nature genetics 41 (12), 1275-1281, 2009
17102009
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ...
Nature biotechnology 37 (10), 1155-1162, 2019
15662019
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
14072010
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
W Wang, R Mauleon, Z Hu, D Chebotarov, S Tai, Z Wu, M Li, T Zheng, ...
Nature 557 (7703), 43-49, 2018
13902018
Fast and accurate long-read assembly with wtdbg2
J Ruan, H Li
Nature methods 17 (2), 155-158, 2020
12422020
The diploid genome sequence of an Asian individual
J Wang, W Wang, R Li, Y Li, G Tian, L Goodman, W Fan, J Zhang, J Li, ...
Nature 456 (7218), 60-65, 2008
11622008
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
Genome sequence of red jungle fowl: Washington University School of Medicine ...
Nature 432 (7018), 717-722, 2004
6302004
TreeFam: a curated database of phylogenetic trees of animal gene families
H Li, A Coghlan, J Ruan, LJ Coin, JK Heriche, L Osmotherly, R Li, T Liu, ...
Nucleic acids research 34 (suppl_1), D572-D580, 2006
6162006
TreeFam: 2008 update
J Ruan, H Li, Z Chen, A Coghlan, LJM Coin, Y Guo, JK Heriche, Y Hu, ...
Nucleic acids research 36 (suppl_1), D735-D740, 2007
3852007
DBG2OLC: efficient assembly of large genomes using long erroneous reads of the third generation sequencing technologies
C Ye, CM Hill, S Wu, J Ruan, Z Ma
Scientific reports 6 (1), 31900, 2016
3732016
Population sequencing enhances understanding of tea plant evolution
X Wang, H Feng, Y Chang, C Ma, L Wang, X Hao, A Li, H Cheng, ...
Nature communications 11 (1), 4447, 2020
2212020
A super pan-genomic landscape of rice
L Shang, X Li, H He, Q Yuan, Y Song, Z Wei, H Lin, M Hu, F Zhao, ...
Cell Research 32 (10), 878-896, 2022
2202022
SilkDB: a knowledgebase for silkworm biology and genomics
J Wang, Q Xia, X He, M Dai, J Ruan, J Chen, G Yu, H Yuan, Y Hu, R Li, ...
Nucleic acids research 33 (suppl_1), D399-D402, 2005
2112005
NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads
J Hu, Z Wang, Z Sun, B Hu, AO Ayoola, F Liang, J Li, JR Sandoval, ...
Genome Biology 25 (1), 107, 2024
1892024
SMARTdenovo: a de novo assembler using long noisy reads
H Liu, S Wu, A Li, J Ruan
Gigabyte 2021, gigabyte15, 2021
1872021
A chromosome-scale genome assembly of cucumber (Cucumis sativus L.)
Q Li, H Li, WU Huang, Y Xu, Q Zhou, S Wang, J Ruan, S Huang, Z Zhang
GigaScience 8 (6), giz072, 2019
1832019
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مقالات 1–20